TY - JOUR
T1 - Assessment of protein disorder region predictions in CASP10
AU - Monastyrskyy, Bohdan
AU - Kryshtafovych, Andriy
AU - Moult, John
AU - Tramontano, Anna
AU - Fidelis, Krzysztof
N1 - KAUST Repository Item: Exported on 2020-10-01
Acknowledged KAUST grant number(s): KUK-I1–012-43
Acknowledgements: Grant sponsor: NIGMS/NIH; Grant number: R01GM100482 (to KF); Grant sponsor:King Abdullah University of Science and Technology (KAUST); Grant number:Award No. KUK-I1–012-43 (to AT); Grant sponsor: EMBO.
This publication acknowledges KAUST support, but has no KAUST affiliated authors.
PY - 2013/11/22
Y1 - 2013/11/22
N2 - The article presents the assessment of disorder region predictions submitted to CASP10. The evaluation is based on the three measures tested in previous CASPs: (i) balanced accuracy, (ii) the Matthews correlation coefficient for the binary predictions, and (iii) the area under the curve in the receiver operating characteristic (ROC) analysis of predictions using probability annotation. We also performed new analyses such as comparison of the submitted predictions with those obtained with a Naïve disorder prediction method and with predictions from the disorder prediction databases D2P2 and MobiDB. On average, the methods participating in CASP10 demonstrated slightly better performance than those in CASP9.
AB - The article presents the assessment of disorder region predictions submitted to CASP10. The evaluation is based on the three measures tested in previous CASPs: (i) balanced accuracy, (ii) the Matthews correlation coefficient for the binary predictions, and (iii) the area under the curve in the receiver operating characteristic (ROC) analysis of predictions using probability annotation. We also performed new analyses such as comparison of the submitted predictions with those obtained with a Naïve disorder prediction method and with predictions from the disorder prediction databases D2P2 and MobiDB. On average, the methods participating in CASP10 demonstrated slightly better performance than those in CASP9.
UR - http://hdl.handle.net/10754/597613
UR - http://doi.wiley.com/10.1002/prot.24391
UR - http://www.scopus.com/inward/record.url?scp=84892954999&partnerID=8YFLogxK
U2 - 10.1002/prot.24391
DO - 10.1002/prot.24391
M3 - Article
C2 - 23946100
SN - 0887-3585
VL - 82
SP - 127
EP - 137
JO - Proteins: Structure, Function, and Bioinformatics
JF - Proteins: Structure, Function, and Bioinformatics
IS - SUPPL.2
ER -