DDBJ with new system and face

H. Sugawara; O. Ogasawara; K. Okubo; T. Gojobori; Y. Tateno

doi:10.1093/nar/gkm889

DDBJ with new system and face

H. Sugawara, O. Ogasawara, K. Okubo, T. Gojobori, Y. Tateno^*

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

59 Scopus citations

Abstract

DDBJ (http://www.ddbj.nig.ac.jp) collected and released 1 880 115 entries or 1 134 086 245 bases in the period from July 2006 to June 2007. The released data contains the high-throughput cDNAs of cricket and high-quality draft genome of medaka among others. Our computer system has been upgraded since March 2007. Another new aspect is an efficient data retrieval tool that has recently been equipped and served at DDBJ. It is called All-round Retrieval for Sequence and Annotation, which enables the user to search for keywords also in the Feature/ Qualifier of the International Nucleotide Sequence Database Collaboration (http://www.insdc.org/). We will also replace our home page with a more efficient one by the end of 2007.

Original language	English (US)
Pages (from-to)	D22-D24
Journal	NUCLEIC ACIDS RESEARCH
Volume	36
Issue number	SUPPL. 1
DOIs	https://doi.org/10.1093/nar/gkm889
State	Published - Jan 2008
Externally published	Yes

ASJC Scopus subject areas

Genetics

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10.1093/nar/gkm889

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title = "DDBJ with new system and face",

abstract = "DDBJ (http://www.ddbj.nig.ac.jp) collected and released 1 880 115 entries or 1 134 086 245 bases in the period from July 2006 to June 2007. The released data contains the high-throughput cDNAs of cricket and high-quality draft genome of medaka among others. Our computer system has been upgraded since March 2007. Another new aspect is an efficient data retrieval tool that has recently been equipped and served at DDBJ. It is called All-round Retrieval for Sequence and Annotation, which enables the user to search for keywords also in the Feature/ Qualifier of the International Nucleotide Sequence Database Collaboration (http://www.insdc.org/). We will also replace our home page with a more efficient one by the end of 2007.",

author = "H. Sugawara and O. Ogasawara and K. Okubo and T. Gojobori and Y. Tateno",

note = "Funding Information: We thank all DDBJ staff for the collection, annotation and distribution of the original data. We are also grateful to H. Yamada and T. Hosokawa for providing us with valuable information on ARSA. DDBJ is funded by Ministry of Education, Culture, Sports, Science and Technology (MEXT) with Management experience grants for national university cooperation. Funding to pay the Open Access publication charges for this article was provided by Japan Society for Promotion of Science Grant no. 16255006.",

year = "2008",

month = jan,

doi = "10.1093/nar/gkm889",

language = "English (US)",

volume = "36",

pages = "D22--D24",

journal = "NUCLEIC ACIDS RESEARCH",

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AU - Ogasawara, O.

AU - Okubo, K.

AU - Gojobori, T.

AU - Tateno, Y.

N1 - Funding Information: We thank all DDBJ staff for the collection, annotation and distribution of the original data. We are also grateful to H. Yamada and T. Hosokawa for providing us with valuable information on ARSA. DDBJ is funded by Ministry of Education, Culture, Sports, Science and Technology (MEXT) with Management experience grants for national university cooperation. Funding to pay the Open Access publication charges for this article was provided by Japan Society for Promotion of Science Grant no. 16255006.

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DDBJ with new system and face

Abstract

ASJC Scopus subject areas

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