TY - JOUR
T1 - DES-TOMATO: A Knowledge Exploration System Focused On Tomato Species
AU - Salhi, Adil
AU - Negrão, Sónia
AU - Essack, Magbubah
AU - Morton, Mitchell J. L.
AU - Bougouffa, Salim
AU - Mohamad Razali, Rozaimi
AU - Radovanovic, Aleksandar
AU - Marchand, Benoit
AU - Kulmanov, Maxat
AU - Hoehndorf, Robert
AU - Tester, Mark A.
AU - Bajic, Vladimir B.
N1 - KAUST Repository Item: Exported on 2020-10-01
Acknowledgements: The computational analysis for this study was performed on Dragon and Snapdragon compute clusters of the Computational Bioscience Research Center (CBRC) at King Abdullah University of Science and Technology (KAUST). This work has been supported by the King Abdullah University of Science and Technology (KAUST) Office of Sponsored Research (OSR) under Awards No URF/1/2302 and No URF/1/1976-02, and KAUST Base Research Fund (BAS/1/1606-01-01) to VBB.
PY - 2017/7/20
Y1 - 2017/7/20
N2 - Tomato is the most economically important horticultural crop used as a model to study plant biology and particularly fruit development. Knowledge obtained from tomato research initiated improvements in tomato and, being transferrable to other such economically important crops, has led to a surge of tomato-related research and published literature. We developed DES-TOMATO knowledgebase (KB) for exploration of information related to tomato. Information exploration is enabled through terms from 26 dictionaries and combination of these terms. To illustrate the utility of DES-TOMATO, we provide several examples how one can efficiently use this KB to retrieve known or potentially novel information. DES-TOMATO is free for academic and nonprofit users and can be accessed at http://cbrc.kaust.edu.sa/des_tomato/, using any of the mainstream web browsers, including Firefox, Safari and Chrome.
AB - Tomato is the most economically important horticultural crop used as a model to study plant biology and particularly fruit development. Knowledge obtained from tomato research initiated improvements in tomato and, being transferrable to other such economically important crops, has led to a surge of tomato-related research and published literature. We developed DES-TOMATO knowledgebase (KB) for exploration of information related to tomato. Information exploration is enabled through terms from 26 dictionaries and combination of these terms. To illustrate the utility of DES-TOMATO, we provide several examples how one can efficiently use this KB to retrieve known or potentially novel information. DES-TOMATO is free for academic and nonprofit users and can be accessed at http://cbrc.kaust.edu.sa/des_tomato/, using any of the mainstream web browsers, including Firefox, Safari and Chrome.
UR - http://hdl.handle.net/10754/625248
UR - https://www.nature.com/articles/s41598-017-05448-0
UR - http://www.scopus.com/inward/record.url?scp=85025463406&partnerID=8YFLogxK
U2 - 10.1038/s41598-017-05448-0
DO - 10.1038/s41598-017-05448-0
M3 - Article
C2 - 28729549
SN - 2045-2322
VL - 7
JO - Scientific Reports
JF - Scientific Reports
IS - 1
ER -