Abstract
Conformations of three pairs of dehydropeptides with the opposite configuration of the ΔPhe residue, Boc-Gly-ΔZ/EPhe-Phe-p- NA (Z- p -NA and E- p -NA), Boc-Gly-ΔZ/EPhe-Phe-OMe (Z-OMe and E-OMe), and Boc-Gly-ΔZ/EPhe-Phe-OH (Z-OH and E-OH) were compared on the basis of CD and NMR studies in MeOH, TFE, and DMSO. The CD results were used as the additional input data for the NMR-based calculations of the detailed solution conformations of the peptides. It was found that Z- p -NA, E- p -NA, Z-OMe, and Z-OH adopt the β-turn conformations and E-OMe and E-OH are unordered. There are two overlapping type III β-turns in Z- p -NA, type II' β-turn in E- p -NA, and type II β-turn in Z-OMe and Z-OH. The results obtained indicate that in the case of methyl esters and peptides with a free carboxyl group, ΔZPhe is a much stronger inducer of ordered conformations than ΔEPhe. It was also found that temperature coefficients of the amide protons are not reliable indicators of intramolecular hydrogen bonds donors in small peptides.
Original language | English (US) |
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Pages (from-to) | 865-875 |
Number of pages | 11 |
Journal | Amino Acids |
Volume | 45 |
Issue number | 4 |
DOIs | |
State | Published - Oct 2013 |
Externally published | Yes |
Keywords
- Circular dichroism
- Dehydropeptide conformation
- Dehydropeptides
- Dehydrophenylalanine configuration
- Nuclear magnetic resonance
- Temperature coefficients of amide protons
ASJC Scopus subject areas
- Biochemistry
- Clinical Biochemistry
- Organic Chemistry