Functional metagenomic analysis of dust-associated microbiomes above the Red Sea.

Nojood Aalismail, David K Ngugi, Ruben Diaz Rua, Intikhab Alam, Michael Cusack, Carlos M. Duarte

Research output: Contribution to journalArticlepeer-review

26 Scopus citations

Abstract

Atmospheric transport is a major vector for the long-range transport of microbial communities, maintaining connectivity among them and delivering functionally important microbes, such as pathogens. Though the taxonomic diversity of aeolian microorganisms is well characterized, the genomic functional traits underpinning their survival during atmospheric transport are poorly characterized. Here we use functional metagenomics of dust samples collected on the Global Dust Belt to initiate a Gene Catalogue of Aeolian Microbiome (GCAM) and explore microbial genetic traits enabling a successful aeolian lifestyle in Aeolian microbial communities. The GCAM reported here, derived from ten aeolian microbial metagenomes, includes a total of 2,370,956 non-redundant coding DNA sequences, corresponding to a yield of ~31 × 106 predicted genes per Tera base-pair of DNA sequenced for the aeolian samples sequenced. Two-thirds of the cataloged genes were assigned to bacteria, followed by eukaryotes (5.4%), archaea (1.1%), and viruses (0.69%). Genes encoding proteins involved in repairing UV-induced DNA damage and aerosolization of cells were ubiquitous across samples, and appear as fundamental requirements for the aeolian lifestyle, while genes coding for other important functions supporting the aeolian lifestyle (chemotaxis, aerotaxis, germination, thermal resistance, sporulation, and biofilm formation) varied among the communities sampled.
Original languageEnglish (US)
JournalScientific reports
Volume9
Issue number1
DOIs
StatePublished - Sep 24 2019

Fingerprint

Dive into the research topics of 'Functional metagenomic analysis of dust-associated microbiomes above the Red Sea.'. Together they form a unique fingerprint.

Cite this