TY - JOUR
T1 - Mountain- and brown hare genetic polymorphisms to survey local adaptations and conservation status of the heath hare (Lepus timidus sylvaticus, Nilsson 1831).
AU - Michell, Craig
AU - Pohjoismäki, Jaakko L. O.
AU - Spong, Göran
AU - Thulin, Carl-Gustaf
N1 - KAUST Repository Item: Exported on 2022-12-12
Acknowledgements: C.-G.T. acknowledge financial support from the Swedish Environmental Protection Agency (project numbers 802-0216-15 and NV-05813-21), and assistance with collection samples from harvested hares from Bo Gunnarsson, Anders Friberg, Martin Hahne and Jonas Malmsten.
PY - 2022/11/3
Y1 - 2022/11/3
N2 - We provide the first whole genome sequences from three specimens of the mountain hare subspecies the heath hare (Lepus timidus sylvaticus), along with samples from two mountain hares (Lepus timidus timidus) and two brown hares (Lepus europaeus) from Sweden. The heath hare has a unique grey winter pelage as compared to other mountain hares (white) and brown hares (mostly brown), and face regional extinction, likely due to competitive exclusion from the non-native brown hare. Whole genome resequencing from the seven hare specimens were mapped to the Lepus timidus pseudoreference genome and used for detection of 11,363,883 polymorphic nucleotide positions. The data presented here could be useful for addressing local adaptations and conservation status of mountain hares and brown hares in Sweden, including unique subspecies.
AB - We provide the first whole genome sequences from three specimens of the mountain hare subspecies the heath hare (Lepus timidus sylvaticus), along with samples from two mountain hares (Lepus timidus timidus) and two brown hares (Lepus europaeus) from Sweden. The heath hare has a unique grey winter pelage as compared to other mountain hares (white) and brown hares (mostly brown), and face regional extinction, likely due to competitive exclusion from the non-native brown hare. Whole genome resequencing from the seven hare specimens were mapped to the Lepus timidus pseudoreference genome and used for detection of 11,363,883 polymorphic nucleotide positions. The data presented here could be useful for addressing local adaptations and conservation status of mountain hares and brown hares in Sweden, including unique subspecies.
UR - http://hdl.handle.net/10754/685536
UR - https://www.nature.com/articles/s41597-022-01794-5
UR - http://www.scopus.com/inward/record.url?scp=85141046945&partnerID=8YFLogxK
U2 - 10.1038/s41597-022-01794-5
DO - 10.1038/s41597-022-01794-5
M3 - Article
C2 - 36329035
SN - 2052-4463
VL - 9
JO - Scientific data
JF - Scientific data
IS - 1
ER -