Parallel motif extraction from very long sequences

Computer Science

• Search Space 100%
• Supercomputer 100%
• Performance Gain 50%
• Contiguous Block 50%
• Serial Execution 50%
• Cache Hierarchy 50%
• Multicore System 50%
• Frequent Patterns 50%
• Statistical Approach 50%

Keyphrases

• Long Sequence 100%
• Motif Extraction 100%
• Combinatorial Method 60%
• Short Sequence 40%
• Modern Application 20%
• Restricted Type 20%
• Workstation 20%
• Sequence Type 20%
• Sequence Periodicity 20%
• Frequent Patterns 20%
• Biological Functionalities 20%
• Modern Architecture 20%
• Large alphabet 20%
• Cache Hierarchy 20%
• Extraction Time 20%