TY - JOUR
T1 - QMX: A versatile environment for hybrid calculations applied to the grafting of Al 2 Cl 3 Me 3 on a silica surface
AU - Kerber, Torsten
AU - Kerber, Rachel Nathaniel
AU - Rozanska, Xavier
AU - Sautet, Philippe
AU - Fleurat-Lessard, Paul
N1 - KAUST Repository Item: Exported on 2020-10-01
Acknowledged KAUST grant number(s): UK-C0017
Acknowledgements: This publication is based on work supported by Award No. UK-C0017, made by King Abdullah University of Science and Technology (KAUST).
This publication acknowledges KAUST support, but has no KAUST affiliated authors.
PY - 2013/1/23
Y1 - 2013/1/23
N2 - We present a new software to easily perform QM:MM and QM:QM' calculations called QMX. It follows the subtraction scheme and it is implemented in the Atomic Simulation Environment (ASE). Special attention is paid to couple molecular calculations with periodic boundaries approaches. QMX inherits the flexibility and versatility of the ASE package: any combination of methods namely force field, semiempirical, first principle, and ab initio, can be used as hybrid potential energy surface (PES). Its ease of use is demonstrated by considering the adsorption of Al2Cl3Me3 on silica surface and by combining different levels of theory (from standard DFT to MP2 calculations) for the so-called High Level cluster with standard PW91 density functional theory calculations for the Low Level environment. It is shown that the High Level cluster must contain the silanol group close to the aluminum atoms. The bridging adsorption is favored by 58 kJ mol-1 at the MP2:PW91 level with respect to the terminal position. Using large clusters at the MP2:PW91 level, it is shown that PW91 calculations are sufficient for structure optimization but that embedded methods are required for accurate energy profiles. © 2013 Wiley Periodicals, Inc.
AB - We present a new software to easily perform QM:MM and QM:QM' calculations called QMX. It follows the subtraction scheme and it is implemented in the Atomic Simulation Environment (ASE). Special attention is paid to couple molecular calculations with periodic boundaries approaches. QMX inherits the flexibility and versatility of the ASE package: any combination of methods namely force field, semiempirical, first principle, and ab initio, can be used as hybrid potential energy surface (PES). Its ease of use is demonstrated by considering the adsorption of Al2Cl3Me3 on silica surface and by combining different levels of theory (from standard DFT to MP2 calculations) for the so-called High Level cluster with standard PW91 density functional theory calculations for the Low Level environment. It is shown that the High Level cluster must contain the silanol group close to the aluminum atoms. The bridging adsorption is favored by 58 kJ mol-1 at the MP2:PW91 level with respect to the terminal position. Using large clusters at the MP2:PW91 level, it is shown that PW91 calculations are sufficient for structure optimization but that embedded methods are required for accurate energy profiles. © 2013 Wiley Periodicals, Inc.
UR - http://hdl.handle.net/10754/599418
UR - http://doi.wiley.com/10.1002/jcc.23225
UR - http://www.scopus.com/inward/record.url?scp=84876064729&partnerID=8YFLogxK
U2 - 10.1002/jcc.23225
DO - 10.1002/jcc.23225
M3 - Article
C2 - 23345191
SN - 0192-8651
VL - 34
SP - 1155
EP - 1163
JO - Journal of Computational Chemistry
JF - Journal of Computational Chemistry
IS - 13
ER -