TY - JOUR
T1 - The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes
AU - Bracken-Grissom, Heather
AU - Collins, Allen G.
AU - Collins, Timothy
AU - Crandall, Keith
AU - Distel, Daniel
AU - Dunn, Casey
AU - Giribet, Gonzalo
AU - Haddock, Steven
AU - Knowlton, Nancy
AU - Martindale, Mark
AU - Medina, Monica
AU - Messing, Charles
AU - O'Brien, Stephen J.
AU - Paulay, Gustav
AU - Putnam, Nicolas
AU - Ravasi, Timothy
AU - Rouse, Greg W.
AU - Ryan, Joseph F.
AU - Schulze, Anja
AU - Worheide, Gert
AU - Adamska, Maja
AU - Bailly, Xavier
AU - Breinholt, Jesse
AU - Browne, William E.
AU - Diaz, M. Christina
AU - Evans, Nathaniel
AU - Flot, Jean-Francois
AU - Fogarty, Nicole
AU - Johnston, Matthew
AU - Kamel, Bishoy
AU - Kawahara, Akito Y.
AU - Laberge, Tammy
AU - Lavrov, Dennis
AU - Michonneau, Francois
AU - Moroz, Leonid L.
AU - Oakley, Todd
AU - Osborne, Karen
AU - Pomponi, Shirley A.
AU - Rhodes, Adelaide
AU - Rodriguez-Lanetty, Mauricio
AU - Santos, Scott R.
AU - Satoh, Nori
AU - Thacker, Robert W.
AU - Van de Peer, Yves
AU - Voolstra, Christian R.
AU - Welch, David Mark
AU - Winston, Judith
AU - Zhou, Xin
N1 - KAUST Repository Item: Exported on 2020-10-01
Acknowledgements: American Genetic Association with a Special Event Award that provided the primary funding for the maiden GIGA workshop; Theodosius Dobzhansky Center for Genome Bioinformatics (Russia Ministry of Science Mega grant 11.G34.31.0068 to S.J. O'Brien, Principal Investigator); Life Technologies and BioNanoGenomics; National Science Foundation's "Assembling the Tree of Life" (DEB awards 0732903, 0829763, 0829783, 0829791, 0829986).
PY - 2013/12/11
Y1 - 2013/12/11
N2 - Over 95% of all metazoan (animal) species comprise the invertebrates, but very few genomes from these organisms have been sequenced. We have, therefore, formed a Global Invertebrate Genomics Alliance (GIGA). Our intent is to build a collaborative network of diverse scientists to tackle major challenges (e.g., species selection, sample collection and storage, sequence assembly, annotation, analytical tools) associated with genome/transcriptome sequencing across a large taxonomic spectrum. We aim to promote standards that will facilitate comparative approaches to invertebrate genomics and collaborations across the international scientific community. Candidate study taxa include species from Porifera, Ctenophora, Cnidaria, Placozoa, Mollusca, Arthropoda, Echinodermata, Annelida, Bryozoa, and Platyhelminthes, among others. GIGA will target 7000 noninsect/nonnematode species, with an emphasis on marine taxa because of the unrivaled phyletic diversity in the oceans. Priorities for selecting invertebrates for sequencing will include, but are not restricted to, their phylogenetic placement; relevance to organismal, ecological, and conservation research; and their importance to fisheries and human health. We highlight benefits of sequencing both whole genomes (DNA) and transcriptomes and also suggest policies for genomic-level data access and sharing based on transparency and inclusiveness. The GIGA Web site () has been launched to facilitate this collaborative venture.
AB - Over 95% of all metazoan (animal) species comprise the invertebrates, but very few genomes from these organisms have been sequenced. We have, therefore, formed a Global Invertebrate Genomics Alliance (GIGA). Our intent is to build a collaborative network of diverse scientists to tackle major challenges (e.g., species selection, sample collection and storage, sequence assembly, annotation, analytical tools) associated with genome/transcriptome sequencing across a large taxonomic spectrum. We aim to promote standards that will facilitate comparative approaches to invertebrate genomics and collaborations across the international scientific community. Candidate study taxa include species from Porifera, Ctenophora, Cnidaria, Placozoa, Mollusca, Arthropoda, Echinodermata, Annelida, Bryozoa, and Platyhelminthes, among others. GIGA will target 7000 noninsect/nonnematode species, with an emphasis on marine taxa because of the unrivaled phyletic diversity in the oceans. Priorities for selecting invertebrates for sequencing will include, but are not restricted to, their phylogenetic placement; relevance to organismal, ecological, and conservation research; and their importance to fisheries and human health. We highlight benefits of sequencing both whole genomes (DNA) and transcriptomes and also suggest policies for genomic-level data access and sharing based on transparency and inclusiveness. The GIGA Web site () has been launched to facilitate this collaborative venture.
UR - http://hdl.handle.net/10754/575591
UR - https://academic.oup.com/jhered/article/105/1/1/858593
UR - http://www.scopus.com/inward/record.url?scp=84890504263&partnerID=8YFLogxK
U2 - 10.1093/jhered/est084
DO - 10.1093/jhered/est084
M3 - Article
SN - 0022-1503
VL - 105
SP - 1
EP - 18
JO - Journal of Heredity
JF - Journal of Heredity
IS - 1
ER -